Run GSEA — wrapper_gsea • BiomarkerWrappers

Run GSEA

Usage

wrapper_gsea(
  x,
  genesets,
  genesets_extra_info = NULL,
  gene_mapping = NULL,
  gene_var = "EntrezIDs",
  statistic_prefix = "t",
  sep = "_",
  min_GS_size = 10,
  max_GS_size = 500,
  topn_genes = 20,
  scoreType = NULL,
  nPermSimple = 1000
)

Arguments

x: TopTable