Dot plot with ORA results for a single contrast

Dot plot with ORA results for a single contrast

Usage

wrapper_ora_dotplot_single(
  x,
  geneset_var = "GenesetID",
  observed_var = "Observed",
  adjp_var = "adj.P.Val",
  color_point_var = NULL,
  plot_x_var = "log.adj.P.Val",
  trim_limits = 0.01,
  color_point = "darkslateblue",
  color_low = "#42399B",
  color_mid = "white",
  color_high = "#D70131",
  size_range = c(2, 10),
  title = "",
  title_size = 10,
  title_width = 100,
  axis_text_y_size = 8,
  axis_text_y_width = 80
)

Arguments

x

TopTable with selected ORA results obtained by running 'wrapper_ora_dispaly_significant' and 'bresults'.

plot_x_var

What to plot on the x-axis. Possible values "log.adj.P.Val" which corresponds to -log10(adjp_var) or "sign.adj.P.Val" which corresponds to -log10(adjp_var) * sign(color_point_var).