Skip to contents

Scatter plot

wrapper_point_plot_core.Rd

Scatter plot

Usage

wrapper_point_plot_core(
  data,
  x_var,
  y_var,
  color_point_var = NULL,
  facet_var = NULL,
  colors_point = NULL,
  scale_gradient = "gradientn",
  color_low_point = "#42399B",
  color_mid_point = "white",
  color_high_point = "#D70131",
  midpoint = 0,
  trim_values = NULL,
  trim_prop = NULL,
  trim_range = NULL,
  ceiling = FALSE,
  centered = FALSE,
  variable_names = NULL,
  title = TRUE,
  subtitle = TRUE,
  xlab = TRUE,
  ylab = TRUE,
  legend_colors_point_title = TRUE,
  legend_position = "right",
  aspect_ratio = NULL,
  facet_label_both = TRUE,
  point_size = 1.5,
  point_shape = 20,
  point_alpha = 1,
  point_stroke = 0.8,
  smooth = "none",
  smooth_method = "auto",
  smooth_formula = y ~ x,
  smooth_se = FALSE,
  smooth_size = 1,
  smooth_linetype = 1,
  title_size = NULL,
  strip_text_size = NULL,
  facet_scales = "fixed",
  xlim = NULL,
  ylim = NULL,
  display_correlation = FALSE,
  background_grid_major = "none"
)

wrapper_point_plot_core_strat(
  data,
  x_var,
  y_var,
  color_point_var = NULL,
  facet_var = NULL,
  strat1_var = NULL,
  strat2_var = NULL,
  colors_point = NULL,
  scale_gradient = "gradientn",
  color_low_point = "#42399B",
  color_mid_point = "white",
  color_high_point = "#D70131",
  midpoint = 0,
  trim_values = NULL,
  trim_prop = NULL,
  trim_range = NULL,
  ceiling = FALSE,
  centered = FALSE,
  variable_names = NULL,
  title = TRUE,
  xlab = TRUE,
  ylab = TRUE,
  strat1_label_both = TRUE,
  strat2_label_both = TRUE,
  legend_colors_point_title = TRUE,
  legend_position = "right",
  aspect_ratio = NULL,
  facet_label_both = TRUE,
  point_size = 1.5,
  point_shape = 20,
  point_alpha = 1,
  point_stroke = 0.8,
  smooth = "none",
  smooth_method = "auto",
  smooth_formula = y ~ x,
  smooth_se = FALSE,
  smooth_size = 1,
  smooth_linetype = 1,
  title_size = NULL,
  strip_text_size = NULL,
  facet_scales = "fixed",
  xlim = NULL,
  ylim = NULL,
  display_correlation = FALSE,
  background_grid_major = "none",
  strat_scales = "fixed",
  strat1_nrow = 1,
  strat1_ncol = NULL,
  strat2_nrow = NULL,
  strat2_ncol = 1,
  less_legends = FALSE
)

Arguments

data

Data frame.

scale_gradient

Possible values: "gradientn", "gradient2", "gradient".

smooth

Possible values: "none", "pooled", "strat".

smooth_method

Method used in geom_smooth(), for example, "auto", "loess", "lm".

strat1_var

Name of the first stratification variable.

strat2_var

Name of the second stratification variable.

Examples


data(bdata)
data <- bdata

x_var <- "GeneA"
y_var <- "GeneB"


wrapper_point_plot_core(data = data, x_var = x_var, y_var = y_var)
#> Warning: No shared levels found between `names(values)` of the manual scale and the
#> data's fill values.


wrapper_point_plot_core(data = bdata, x_var = x_var, y_var = y_var, color_point_var = "Sex", smooth = "strat")
#> `geom_smooth()` using method = 'loess'


wrapper_point_plot_core(data = bdata, x_var = x_var, y_var = y_var, color_point_var = "Age")