Heatmap of gene expression summarized per group

Usage

wrapper_summarized_expression_heatmap(
  x,
  group,
  adjp = NULL,
  center = TRUE,
  scale = TRUE,
  summary_fun = NULL,
  skip_zeros = FALSE,
  title = "",
  name = NULL,
  centered = TRUE,
  palette = NULL,
  rev = FALSE,
  trim_values = NULL,
  trim_prop = NULL,
  trim_range = NULL,
  ceiling = FALSE,
  cell_fun_method = "none",
  font_size = 10,
  rect_gp = grid::gpar(col = "white"),
  cluster_rows = FALSE,
  cluster_columns = FALSE,
  row_dend_reorder = FALSE,
  column_dend_reorder = FALSE,
  show_row_names = TRUE,
  show_column_names = TRUE,
  top_annotation = NULL,
  extra_top_annotation = NULL,
  row_names_gp = grid::gpar(fontsize = 9),
  column_names_gp = grid::gpar(fontsize = 9),
  row_names_max_width = unit(30, "cm"),
  column_names_max_height = unit(30, "cm"),
  row_names_width = 80,
  draw = TRUE,
  return = "ht",
  ...
)

Arguments

x: Matrix with gene expression.
group: Vector of factors with grouping.
adjp: Matrix with adjusted p-values for selected groups. Column names must correspond to the groups.